Eutherian phylogeny.


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Horse Polar_br Ind_Ele Dromedary Cow Rhino Tiger Tapir Deer African_E Pig ... Dromedary 0 8 7 4 8 4. Dairy animals 0 3 7 6 0 6. Rhino 0 ...
Transcripts
Slide 1

Eutherian phylogeny

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Beta globin – crude information Horse VQLSGEEKAAVLA Polar_br VHLTGEEKSLVTG Ind_Ele VNLTAAEKTQVTN Dromedary VHLSGDEKNAVHG Cow - MLTAEEKAAVTA Rhino VDLTAEEKAAVLA Tiger SFLSAEEKGLVNG Tapir VHLHGDEKAAVLA Deer - MLTAEEKAAVTA African_E VNLTAAEKTQVTN Pig VHLSAEEKEAVLG

Slide 3

Bgobin information - separation Horse Polar_br Ind_Ele Dromedary Cow Rhino Tiger Tapir Deer African_E Pig Horse 0 6 8 5 3 7 3 5 8 4 Polar_br 0 6 5 6 5 Ind_Ele 0 8 6 8 6 0 7 Dromedary 0 8 7 4 8 4 Cow 0 3 7 6 0 6 Rhino 0 7 4 3 6 4 Tiger 0 9 7 8 5 Tapir 0 6 8 5 Deer 0 6 African_E 0 7 Pig 0

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Bglobin - UPGMA

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Nuclear agreement mtDNA

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reality? Pig Dromedary Cow Deer Tiger Polar Bear Horse Rhino Tapir Elephants

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Bglobin - Neighbor-joining utilizing PAM separation + - Polar br ! ! +Ind Ele ! + - - 1 ! ! +African E - 9 - 7 ! ! +Cow ! ! + - 2 ! + - 6 +Deer ! ! ! + - Rhino ! ! +- - Horse ! + - 3 ! + - 4 + - Tapir ! ! ! ! + - 5 + - Dromedary ! ! ! +- - 8 + - Pig ! + - - Tiger

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Parsimony? (3 trees found) +- - Tapir + - - 7 ! +- - Dromedary +- - 3 ! ! + - - Pig ! ! ! ! + - 10 + - Rhino ! ! ! ! ! ! +- - Deer ! +- - 5 + - 8 ! ! ! +- - Cow - 1 ! ! ! +- - 4 +- - African E ! ! + - 9 ! ! ! +- - Ind Ele ! + - 2 ! ! +- - Tiger ! + - 6 ! +- - Polar br ! + - - Horse +- - Tapir + - - 7 ! +- - Dromedary +- - 3 ! ! + - - Pig ! ! ! ! + - 10 + - Rhino ! ! ! ! ! ! +- - Deer ! +- - 5 + - 8 ! ! ! +- - Cow - 1 ! ! ! +- - 4 + - Tiger ! ! +- - 6 ! ! ! ! +- - African E ! + - 2 +- - 9 ! ! +- - Ind Ele ! ! ! + - Polar br ! + - - Horse

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